STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A1751Phage transcriptional regulator, AlpA. (79 aa)    
Predicted Functional Partners:
Bxe_A0365
Glutamate synthase (NADH) large subunit.
    
  0.816
Bxe_A1231
Phage transcriptional regulator, AlpA.
  
     0.768
Bxe_C0412
Phage transcriptional regulator, AlpA.
  
     0.763
Bxe_A1097
Putative phage integrase; Belongs to the 'phage' integrase family.
 
   
 0.719
Bxe_A2541
Putative CP4-like integrase; Belongs to the 'phage' integrase family.
 
   
 0.681
Bxe_A4470
Putative phage integrase; Belongs to the 'phage' integrase family.
 
   
 0.668
Bxe_A1709
Putative phage integrase; Belongs to the 'phage' integrase family.
 
   
 0.613
Bxe_C0410
Putative phage integrase; Belongs to the 'phage' integrase family.
 
   
 0.594
Bxe_C0409
Putative phage integrase; Belongs to the 'phage' integrase family.
 
   
 0.588
Bxe_B0357
Phosphate butyryltransferase.
  
  
  0.523
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.