STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A1910ABC multidrug efflux pump, inner membrane subunit. (376 aa)    
Predicted Functional Partners:
Bxe_A1912
ABC multidrug efflux pump, ATPase subunit.
 
 0.998
Bxe_A1913
ABC multidrug efflux pump, ATPase subunit.
 
 0.998
Bxe_A1914
ABC multidrug efflux pump, membrane fusion protein, HlyD subfamily.
  
 0.963
nodI
ABC Lipooligosaccharide exporter, ATPase subunit, NodI family; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.
 
 
 0.956
Bxe_A0393
ABC multidrug efflux pump, ATPase subunit.
 
 
 0.953
Bxe_B2277
ABC efflux pump, ATPase subunit.
 
 
 0.917
Bxe_A1911
ABC multidrug efflux pump, inner membrane subunit.
 
  
 
0.873
Bxe_B2340
ABC multidrug efflux pump, fused duplicated ATPase and inner membrane subunits.
 
 
0.824
Bxe_B2339
ABC efflux pump, membrane fusion protein, HlyD subfamily.
  
 0.813
Bxe_B2703
ABC spermidine/putrescine family transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
   
  0.709
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.