STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2024Putative thioredoxin reductase, trxB. (353 aa)    
Predicted Functional Partners:
Bxe_A2362
Thioredoxin; Belongs to the thioredoxin family.
  
 0.979
Bxe_A2309
Putative alkyl hydroperoxide reductase subunit C.
  
 
 0.924
Bxe_B1205
Alkyl hydroperoxide reductase protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.924
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
     
 0.920
Bxe_A0743
Thioredoxin.
  
 0.877
Bxe_A0365
Glutamate synthase (NADH) large subunit.
    
 0.873
Bxe_A4418
Putative thioredoxin protein.
  
 0.842
Bxe_B1552
L-selenocysteine selenide-lyase (L-alanine-forming) / cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.809
Bxe_C0124
L-selenocysteine selenide-lyase (L-alanine-forming) / cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.809
Bxe_B0816
Putative transmembrane protein.
  
 0.806
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.