STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2073Xanthine dehydrogenase, molybdenum binding subunit apoprotein. (980 aa)    
Predicted Functional Partners:
Bxe_A2075
Oxidoreductase, iron-sulfur subunit.
 0.997
Bxe_A2074
Molybdopterin dehydrogenase, FAD-binding protein; Citation: Schenk,S., Hoelz,A., Krauss,B. andDecker, K.J. Mol. Biol. 284 (5), 1323-1339 (1998).
 
 0.996
Bxe_A4351
Putative carbon-monoxide dehydrogenase, small subunit (CoxS).
 0.985
Bxe_A2145
Carbon monoxide dehydrogenase, small subunit.
 0.984
Bxe_B0075
Putative Carbon monoxide dehydrogenase, small chain CutC.
 0.975
Bxe_C0030
Carbon monoxide dehydrogenase, small chain(CoxS).
 0.974
Bxe_B2532
Carbon-monoxide dehydrogenase small subunit.
 0.965
Bxe_A2144
Carbon monoxide dehydrogenase, medium subunit.
 0.964
Bxe_A4353
Putative carbon monoxide dehydrogenase, medium subunit (CoxM).
 
 0.964
Bxe_B0076
Putative Carbon monoxide dehydrogenase medium subunit.
 0.964
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.