STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catBMuconate cycloisomerase; Citation: Annu Rev Microbiol. 1996;50:553-90. Gene226 (2), 189-198 (1999); Belongs to the mandelate racemase/muconate lactonizing enzyme family. (385 aa)    
Predicted Functional Partners:
catC
Muconolactone delta-isomerase; Citation: Annu Rev Microbiol. 50:553-90 (1996). J.Bacteriol. 179 (16), 5226-5231 (1997); Belongs to the muconolactone Delta-isomerase family.
 
 
 0.999
catA
Catechol 1,2-dioxygenase (CatA); Citation: Annu Rev Microbiol. 50:553-90 (1996).Gene 226 (2), 189-198 (1999).
 
 
 0.998
clcA
3-chlorocatechol 1,2-dioxygenase.
 
 
 0.946
Bxe_B0274
Carboxymethylenebutenolidase.
   
 
 0.912
Bxe_B0548
Carboxymethylenebutenolidase.
   
 
 0.912
Bxe_B2832
Dienelactone hydrolase.
   
 
 0.912
catR
Transcriptional regulator, LysR family; Citation: Annu Rev Microbiol. 1996;50:553-90; Belongs to the LysR transcriptional regulatory family.
 
   
 0.834
Bxe_C1041
Putative mandelate racemase/muconate lactonizing enzyme.
  
  
 
0.831
benD
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase; Citation: Annu Rev Microbiol. 1996;50:553-90; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.822
benC
Benzoate 1,2-dioxygenase, electron transfer subunit (benC); Citation: Annu Rev Microbiol. 1996;50:553-90.
 
  
 0.820
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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