STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2138Conserved hypothetical protein containing von Willebrand factor type A domain. (337 aa)    
Predicted Functional Partners:
Bxe_B1645
Protoporphyrin IX magnesium-chelatase.
  
 0.977
Bxe_A2139
Hypothetical TPR domain protein.
   
 0.971
Bxe_A2140
Putative exported protein.
 
   
 0.956
Bxe_A2137
Putative transmembrane protein.
 
     0.952
Bxe_A2136
Conserved hypothetical protein, lipoprotein.
 
  
 0.947
Bxe_A2135
MoxR-like ATPase, putative transcriptional regulator, C1 metabolism.
 
 
 0.939
Bxe_B2421
Putative MxaR-like protein.
 
 
 0.800
Bxe_A2132
Putative arylsulfatase.
 
     0.778
Bxe_B1646
Cobaltochelatase CobN subunit.
  
 0.722
Bxe_A2133
Putative nonspecific acid phosphatase, NapD-like protein.
 
     0.700
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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