STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2239Putative transmembrane protein. (497 aa)    
Predicted Functional Partners:
Bxe_A2238
Putative glycosyl transferase, group 1.
 
   
 0.951
Bxe_A2240
Putative glycosyltransferase group 1, RfaG-like protein.
 
   
 0.923
Bxe_A2237
Predicted glycosyl transferase, group 1.
 
   
 0.908
Bxe_A2241
Putative glycosyl transferase, family 2, involved in cell wall biogenesis.
 
   
 0.894
Bxe_A2522
Putative glycosyltransferase, group 1.
 
     0.780
Bxe_A2532
Putative glycosyl transferase.
 
     0.772
Bxe_A2521
Putative glycosyl transferase, group 1.
  
     0.762
Bxe_B3026
Putative replication protein.
  
     0.748
Bxe_A2537
Putative lipopolysaccharide biosynthesis- related glycosyltransferase.
  
     0.745
Bxe_A2939
Putative transmembrane protein; Similar to transglutaminase/cysteine proteases.
  
     0.724
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.