STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2356ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit. (270 aa)    
Predicted Functional Partners:
Bxe_A2355
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
 0.936
Bxe_A2357
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein.
 
 
  0.927
Bxe_B2849
ABC molybdate transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.861
Bxe_A3159
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein.
 
 
  0.850
Bxe_B0493
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
 0.849
Bxe_C0735
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
 0.821
Bxe_B0495
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein.
 
 
 0.809
Bxe_C0236
ABC sulfate ester transporter, inner membrane subunit.
 
 0.801
Bxe_B0456
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
 
 0.795
Bxe_B1047
ABC nitrate transporter, periplasmic ligand binding protein.
 
 0.794
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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