STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2394Putative short-chain dehydrogenase/reductase SDR. (268 aa)    
Predicted Functional Partners:
Bxe_C0297
Putative short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.799
Bxe_A2268
Short chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.780
Bxe_C0288
Putative short-chain dehydrogenase/reductase.
  
     0.773
Bxe_A3366
Short-chain dehydrogenase/reductase SDR.
  
     0.772
Bxe_A0095
Putative short chain dehydrogenase.
  
     0.770
Bxe_C0583
Putative short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.760
Bxe_A2696
Putative short-chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.732
Bxe_B1429
Putative short chain dehydrogenase.
  
 
  0.712
Bxe_C0125
Putative short-chain dehydrogenase.
  
  
  0.674
Bxe_A0365
Glutamate synthase (NADH) large subunit.
     
 0.649
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.