STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2529Beta-mannosidase. (882 aa)    
Predicted Functional Partners:
Bxe_A2525
Putative acyl-carrier, MmcB like protein; Citation: Mao,Y., Varoglu,M. and Sherman, D.H.Chem.Biol. 6 (4), 251-263 (1999).
 
   
 0.927
Bxe_A2527
Putative seryl-tRNA synthetase, SerRS-like protein.
 
     0.927
Bxe_A2526
Putative acyl-CoA dehydrogenase.
 
   
 0.917
Bxe_A2038
Putative esterase/lipase/thioesterase.
 
  
  0.833
Bxe_A2037
Putative acyl carrier protein AcpP, PP-binding protein.
 
   
 0.813
Bxe_A2132
Putative arylsulfatase.
  
 0.764
Bxe_B1573
Putative choline-sulfatase.
  
 0.764
Bxe_A2516
Predicted hydrolase of the alpha/beta superfamily.
  
     0.724
Bxe_A2528
Conserved hypothetical protein.
       0.699
glk
Glucokinase; In the N-terminal section; belongs to the bacterial glucokinase family.
     
 0.665
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.