Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_A0190 | Bxe_A1361 | TPR repeat protein. | Conserved hypothetical protein; Tetratricopeptide repeat present. | 0.512 |
Bxe_A0190 | Bxe_A2681 | TPR repeat protein. | Putative transmembrane protein, murein hydrolase LrgB like protein. | 0.415 |
Bxe_A0190 | Bxe_A4384 | TPR repeat protein. | Conserved hypothetical protein. | 0.500 |
Bxe_A0190 | Bxe_B0911 | TPR repeat protein. | TPR domain protein. | 0.774 |
Bxe_A0959 | Bxe_A1361 | Conserved hypothetical protein; TPR domain present. | Conserved hypothetical protein; Tetratricopeptide repeat present. | 0.530 |
Bxe_A0959 | Bxe_A2681 | Conserved hypothetical protein; TPR domain present. | Putative transmembrane protein, murein hydrolase LrgB like protein. | 0.415 |
Bxe_A0959 | Bxe_A4384 | Conserved hypothetical protein; TPR domain present. | Conserved hypothetical protein. | 0.518 |
Bxe_A0959 | Bxe_B0911 | Conserved hypothetical protein; TPR domain present. | TPR domain protein. | 0.782 |
Bxe_A1361 | Bxe_A0190 | Conserved hypothetical protein; Tetratricopeptide repeat present. | TPR repeat protein. | 0.512 |
Bxe_A1361 | Bxe_A0959 | Conserved hypothetical protein; Tetratricopeptide repeat present. | Conserved hypothetical protein; TPR domain present. | 0.530 |
Bxe_A1361 | Bxe_A2681 | Conserved hypothetical protein; Tetratricopeptide repeat present. | Putative transmembrane protein, murein hydrolase LrgB like protein. | 0.427 |
Bxe_A1361 | Bxe_A4040 | Conserved hypothetical protein; Tetratricopeptide repeat present. | TPR domain protein. | 0.533 |
Bxe_A1361 | Bxe_B0911 | Conserved hypothetical protein; Tetratricopeptide repeat present. | TPR domain protein. | 0.698 |
Bxe_A2681 | Bxe_A0190 | Putative transmembrane protein, murein hydrolase LrgB like protein. | TPR repeat protein. | 0.415 |
Bxe_A2681 | Bxe_A0959 | Putative transmembrane protein, murein hydrolase LrgB like protein. | Conserved hypothetical protein; TPR domain present. | 0.415 |
Bxe_A2681 | Bxe_A1361 | Putative transmembrane protein, murein hydrolase LrgB like protein. | Conserved hypothetical protein; Tetratricopeptide repeat present. | 0.427 |
Bxe_A2681 | Bxe_A2682 | Putative transmembrane protein, murein hydrolase LrgB like protein. | Putative murein hydrolase exporter LrgA(holin) like protein. | 0.995 |
Bxe_A2681 | Bxe_A2683 | Putative transmembrane protein, murein hydrolase LrgB like protein. | Conserved hypothetical protein. | 0.596 |
Bxe_A2681 | Bxe_A2684 | Putative transmembrane protein, murein hydrolase LrgB like protein. | Dihydropteridine reductase. | 0.420 |
Bxe_A2681 | Bxe_A4040 | Putative transmembrane protein, murein hydrolase LrgB like protein. | TPR domain protein. | 0.415 |
page 1 of 3