STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2751Putative acyl CoA-transferase subunit A. (276 aa)    
Predicted Functional Partners:
Bxe_A2752
Putative acyl CoA-acetate/3-ketoacid CoA transferase beta subunit, AtoA-like protein.
 0.996
Bxe_B1889
Putative glutaconate CoA-transferase, subunit B.
 0.989
Bxe_C1039
Putative coenzyme A transferase, subunit B.
 
 0.983
Bxe_A1367
butyryl-CoA:acetate CoA transferase.
  
 0.961
pcaJ
3-oxoadipate CoA-transferase beta subunit.
  
 0.961
Bxe_C0573
butyryl-CoA:acetate CoA transferase.
  
 0.961
Bxe_A2756
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.
    
  0.821
Bxe_A2755
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-.
       0.775
Bxe_A2754
Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.774
Bxe_A2750
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.
       0.773
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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