STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2766Putative peroxidase (non-haem peroxidase), BpoB, alpha/beta hydrolase family. (293 aa)    
Predicted Functional Partners:
Bxe_A3603
Putative oxygenase.
 
    0.901
acpP-2
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.827
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.772
Bxe_A2765
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
   0.640
Bxe_A2037
Putative acyl carrier protein AcpP, PP-binding protein.
 
 
  0.613
Bxe_A2525
Putative acyl-carrier, MmcB like protein; Citation: Mao,Y., Varoglu,M. and Sherman, D.H.Chem.Biol. 6 (4), 251-263 (1999).
 
 
  0.607
Bxe_A3549
HOMODA hydrolase (CmtE); P-cumate pathway; Citation: J. Bacteriol. 178 (5), 1351-1362 (1996).
  
  
 0.552
Bxe_A0097
Putative acyl carrier protein.
   
  0.529
Bxe_A0152
Hypothetical protein.
   
  0.529
Bxe_A0928
Putative acyl-carrier protein.
   
  0.529
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.