STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2914Signal transduction protein-like protein. (485 aa)    
Predicted Functional Partners:
ycgR
Conserved hypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
  
    0.729
Bxe_B3026
Putative replication protein.
  
     0.711
Bxe_A2913
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
    
  0.695
Bxe_A2518
Polysaccharide exporter, (PST) Family.
  
     0.687
Bxe_A2229
Polysaccharide transporter, (PST) Family.
  
     0.676
Bxe_A2912
Putative diguanylate phosphodiesterase (EAL domain).
 
     0.668
Bxe_A0132
Flagellar biosynthesis protein, flhF.
 
   
 0.667
Bxe_A2026
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.661
Bxe_A4067
Amino acid-binding domain sensor hybrid histidine kinase / PAS/PAC sensor hybrid histidine kinase.
   
 
 0.661
Bxe_B0008
CheC, inhibitor of MCP methylation.
 
     0.648
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.