STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A3051Putative bacteriophage DNA circulation protein, Mu-like protein. (475 aa)    
Predicted Functional Partners:
Bxe_A3050
Putative bacteriophage tail protein GpP,Mu-like protein.
    0.979
Bxe_A3047
Putative bacteriophage tail protein GP47,Mu-like protein.
    0.951
Bxe_A3046
Hypothetical protein.
    0.947
Bxe_A3049
Putative baseplate assembly protein Gp45,Mu-like protein.
 
    0.947
Bxe_A3048
Putative bacteriophage protein GP46, Mu-like protein.
 
    0.946
Bxe_A3052
Putative membrane protein, phage K related protein.
 
    0.932
Bxe_A3056
Putative bacteriophage tail sheath protein GpL, Mu-like protein.
 
    0.878
Bxe_A3064
Putative phage portal protein Gp17.
 
    0.724
Bxe_A3045
Hypothetical protein.
       0.664
Bxe_A3054
Hypothetical protein.
  
    0.568
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.