STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A3267RNAse G. (489 aa)    
Predicted Functional Partners:
pnp
Putative polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.971
Bxe_A4126
Conserved hypothetical protein; Displays ATPase and GTPase activities.
 
 
 
 0.965
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.953
Bxe_A3266
Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
    0.914
Bxe_A2510
Signal peptidase I, Serine peptidase, MEROPS family S26A; Belongs to the peptidase S26 family.
  
    0.810
rhlE
Putative ATP-dependent RNA helicase 1; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.
   
 
 0.741
Bxe_A1652
Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 
 0.741
Bxe_A2189
Putative ATP-dependent RNA helicase, rhlE; Belongs to the DEAD box helicase family.
   
 
 0.741
Bxe_A3295
Putative ATP-dependent RNA helicase 2; Belongs to the DEAD box helicase family.
   
 
 0.741
Bxe_A4436
ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family.
   
 
 0.741
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.