STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A3316Conserved hypothetical protein. (391 aa)    
Predicted Functional Partners:
Bxe_A3315
Putative ATPase, AAA family protein.
 
    0.906
Bxe_A3317
Benzoate membrane transport protein.
       0.624
Bxe_C0033
Putative ATPase.
 
    0.551
Bxe_A2148
Putative MoxR-like ATPase, CoxD; Citation: Schubel,U., Kraut,M., Morsdorf,G. andMeyer,O J. Bacteriol. 177 (8), 2197-2203(1995)Santiago, B., Schubel,U., Egelseer,C. andMeyer,O.Gene 236 (1), 115- 124 (1999).
 
    0.538
Bxe_A4038
Putative acyl-CoA dehydrogenase oxidoreductase.
  
     0.533
Bxe_A4354
Putative ATPase.
 
    0.513
Bxe_A1000
Putative acyl-CoA dehydrogenase.
  
     0.511
Bxe_B0379
Putative acyl-CoA dehydrogenase.
  
     0.506
Bxe_B2241
Putative 2-hydroxychromene-2- carboxylate isomerase family protein.
  
     0.474
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.