STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A3456Two component transcriptional regulator, winged helix family. (220 aa)    
Predicted Functional Partners:
Bxe_A2065
Putative periplasmic sensor signal transduction histidine kinase, QseC; Part of two component quorum sensing system; Citation: Sperandio,V., Torres,A.G. andKaper, J.B.Mol. Microbiol. 43 (3), 809-821 (2002).
 0.987
Bxe_A4067
Amino acid-binding domain sensor hybrid histidine kinase / PAS/PAC sensor hybrid histidine kinase.
 
 0.985
Bxe_A2026
PAS/PAC sensor hybrid histidine kinase.
 0.983
Bxe_A3457
Putative signal transduction histidine kinase.
 0.981
Bxe_B1520
Signal transduction histidine kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.975
Bxe_C0521
Multi sensor hybrid histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.975
Bxe_B0221
GAF sensor hybrid histidine kinase.
 
0.959
Bxe_A2619
PAS/PAC sensor hybrid histidine kinase.
 
 0.951
Bxe_A4534
PAS/PAC sensor hybrid histidine kinase.
 
 0.951
Bxe_C1277
PAS/PAC sensor hybrid histidine kinase.
 
 0.951
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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