STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A3591Putative redutase. (418 aa)    
Predicted Functional Partners:
Bxe_B0173
Rieske (2Fe-2S) region.
 
 0.979
Bxe_A2213
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 0.961
andAb
Anthranilate dioxygenase ferredoxin subunit(AndAb); Citation: J. Bacteriol. 185 (19), 5871-5881(2003).
 
 0.913
Bxe_B1110
Anthranilate dioxygenase ferredoxin reductase(AndAb); Citation: J. Bacteriol. 183 (2), 700-708 (2001).
 
 0.911
Bxe_B1329
Putative dioxygenase, ferredoxin reductase component.
 
0.907
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
   
 0.907
Bxe_A3592
Putative ferredoxin.
 
 
 0.902
Bxe_B0185
Pyridine nucleotide-disulfide oxidoreductase, class I.
  
  
 
0.898
Bxe_A2212
Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 0.891
Bxe_C0940
Putative Rieske (2Fe-2S) ferredoxin.
 0.887
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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