STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A3751Hypothetical protein. (504 aa)    
Predicted Functional Partners:
Bxe_A3750
Putative transposase-associated ATP- binding protein.
     0.931
Bxe_A2452
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.762
Bxe_A0081
Putative insertion sequence ATP-binding protein.
     0.722
Bxe_A2666
Putative IS21 transposase-associated ATP- binding protein.
     0.722
Bxe_B1946
Putative transposase-associated ATP- binding protein.
     0.722
Bxe_A1787
Putative transposase-associated ATP- binding protein.
     0.715
Bxe_A2443
Putative transposase-associated ATP- binding protein.
     0.711
Bxe_A2558
Putative transposase-associated ATP- binding protein.
     0.711
Bxe_A2707
Putative transposase ATP-binding protein, IstB.
     0.711
Bxe_A3172
Putative transposase-associated ATP- binding protein, IstB.
     0.711
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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