STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A3887Major facilitator superfamily (MFS) transporter. (403 aa)    
Predicted Functional Partners:
Bxe_A4094
Conserved hypothetical protein.
  
     0.632
Bxe_A3886
Putative xanthine dehydrogenase.
       0.582
Bxe_A4507
Hypothetical protein.
       0.569
Bxe_C0229
Conserved hypothetical protein.
  
     0.569
Bxe_A4095
Putative gluconate dehydrogenase.
  
  
  0.562
Bxe_A1323
5-deoxyglucuronate isomerase.
   
  
 0.527
Bxe_A1324
2-keto-myo-inositol dehydratase.
   
    0.516
Bxe_B1092
Transcriptional regulator, PadR family.
  
   
 0.516
Bxe_A3885
Xanthine dehydrogenase, molybdenum binding subunit apoprotein / Xanthine oxidase.
       0.515
Bxe_A1979
Putative epimerase, KguE-like protein.
  
     0.502
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.