STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A4204Transcriptional regulator, DeoR family. (256 aa)    
Predicted Functional Partners:
Bxe_B1513
Putative acetyl-CoA synthetase.
    
   0.767
Bxe_A4124
PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.670
Bxe_A4153
PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family.
 
  
 0.655
Bxe_A0639
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.593
Bxe_A0637
Major intrinsic protein, glycerol uptake channel; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.573
Bxe_A4152
TC 4.A.1.1.2; TC 4.A.1.1.2.
 
   
 0.566
Bxe_A1323
5-deoxyglucuronate isomerase.
  
  
 0.538
Bxe_B2967
Putative acetyltransferase, GNAT family.
   
   0.528
Bxe_B2935
Putative membrane protein.
   
  
 0.508
Bxe_A2336
Sugar kinase, ribokinase family.
 
 
 0.496
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.