STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A4353Putative carbon monoxide dehydrogenase, medium subunit (CoxM). (265 aa)    
Predicted Functional Partners:
coxL1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; Citation: Appl. Environ. Microbiol. 69 (12),7257- 7265 (2003).
 
 0.982
Bxe_A4351
Putative carbon-monoxide dehydrogenase, small subunit (CoxS).
 0.974
Bxe_A2073
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.964
coxL2
Carbon monoxide dehydrogenase, large subunit apoprotein; Similar to the protein described byKing G.M. (AEM, 2003), the latter which is located onmegaplasmid); Citation: Appl. Environ. Microbiol. 69 (12),7257- 7265 (2003).
 
 0.943
Bxe_B0074
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.943
Bxe_B2533
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.943
coxL
Carbon monoxide dehydrogenase form I, large chain; Citation: Appl. Environ. Microbiol. 69 (12),7257- 7265 (2003).
 
 0.943
Bxe_B1053
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.942
Bxe_A2145
Carbon monoxide dehydrogenase, small subunit.
 0.919
Bxe_C0030
Carbon monoxide dehydrogenase, small chain(CoxS).
 0.918
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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