STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A4440Transcriptional regulator, AraC family. (352 aa)    
Predicted Functional Partners:
andR
Transcriptional regulator, AraC family; For anthranilate dioxygenase genes; Citation: J. Bacteriol. 185 (19), 5871-5881 (2003).
  
 
   0.749
Bxe_A1125
Transcriptional regulator, AraC family.
  
     0.738
Bxe_A4443
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
 
   
 0.645
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.618
Bxe_A4444
Ethanolamine ammonia-lyase heavy chain.
 
   
 0.610
Bxe_B0221
GAF sensor hybrid histidine kinase.
    
 0.539
Bxe_A0365
Glutamate synthase (NADH) large subunit.
    
  0.537
ribB-2
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.466
Bxe_A2193
Transcriptional regulator, AraC family.
 
 
 0.447
Bxe_B1384
Urea amidolyase-related protein.
  
 
  0.442
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.