STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0049Conserved hypothetical protein. (91 aa)    
Predicted Functional Partners:
Bxe_B0050
Heavy metal/H+ antiporter, CDF family.
  
 0.972
flhA
Glutathione-dependent formaldehyde dehydrogenase(FlhA); Function confirmed by biochemical assay & mutantanalysis; Citation: J Bacteriol, 186:2173-2178; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
 0.914
fliA
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
    
   0.849
fghA
S-Formylglutathione hydrolase (FghA); Serine hydrolase involved in the detoxification of formaldehyde.
  
  
 0.795
Bxe_B1701
Putative exported protein.
  
  
 0.788
Bxe_B2109
Putative esterase.
  
  
 0.788
Bxe_A0157
Flagellar motor switch protein FliN.
    
   0.727
Bxe_A3123
Putative type III secretion protein, FliN like protein.
    
   0.727
Bxe_B0051
Hypothetical protein.
       0.556
merP-2
Periplasmic mecuric binding protein, MerP; Involved in mercury resistance. Acts as a mercury scavenger that specifically binds to a mercuric ion in the periplasm and probably passes it to the cytoplasmic mercuric reductase MerA via the mercuric transport protein MerT.
 
  
 0.549
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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