STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0063ABC nickel transporter, inner membrane subunit. (315 aa)    
Predicted Functional Partners:
Bxe_B0065
ABC nickel transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.981
Bxe_B0064
ABC nickel transporter, inner membrane subunit.
 
 0.980
Bxe_A0838
ABC peptide transporter, inner membrane subunit.
 
 0.976
Bxe_A0836
ABC peptide transporter, periplasmic ligand binding protein.
 0.959
Bxe_B0062
ABC nickel transporter, periplasmic ligand binding protein.
 0.957
Bxe_B0066
ABC nickel transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.956
Bxe_A0835
ABC oligopeptide/dipeptide transporter, duplicated ATPase subunits; Belongs to the ABC transporter superfamily.
 
 0.933
Bxe_C0194
ABC peptide/opine/nickel family transporter, ATPase subunit.
 
 0.928
Bxe_B1973
ABC peptide transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.920
Bxe_A0185
ABC dipeptide/oligopeptide/nickel transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 0.919
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.