STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0177Cupin domain protein. (175 aa)    
Predicted Functional Partners:
Bxe_A4152
TC 4.A.1.1.2; TC 4.A.1.1.2.
   
 
 0.973
Bxe_B0180
Putative short chain dehydrogenase.
 
  
  0.938
Bxe_B0175
Iron-sulfur cluster-binding protein, rieske family.
 
     0.929
Bxe_B0181
Putative thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family.
 
     0.921
nadX
Conserved hypothetical protein; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
     0.921
Bxe_B0176
Putative short chain dehydrogenase.
 
  
  0.917
Bxe_B0178
Hydrolase, alpha/beta fold family.
 
     0.892
Bxe_B0184
Glyoxalase family protein.
 
     0.891
Bxe_A4117
KpsF/GutQ; Belongs to the SIS family. GutQ/KpsF subfamily.
  
 
 0.872
Bxe_B0183
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.864
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.