STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0205Rubredoxin; RubA. (81 aa)    
Predicted Functional Partners:
Bxe_B1329
Putative dioxygenase, ferredoxin reductase component.
  
 0.869
Bxe_A2214
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.854
Bxe_A3557
P-cumate dioxygenase ferredoxin reductase subunit (CmtAa); P-cumate pathway; Citation: J. Bacteriol. 178 (5), 1351-1362 (1996).
  
 0.854
Bxe_A3591
Putative redutase.
  
 0.854
Bxe_B0185
Pyridine nucleotide-disulfide oxidoreductase, class I.
  
 0.854
Bxe_B1111
Anthranilate dioxygenase reductase (AndAa); Citation: J. Bacteriol. 185 (19), 5871-5881 (2003).
  
 0.854
Bxe_C0951
Putative FAD-dependent pyridine nucleotide- disulfide oxidoreductase.
  
 0.854
andAa
Anthranilate dioxygenase, ferredoxin reductase subunit (AndAa); Citation: J. Bacteriol. 185 (19), 5871-5881(2003).
  
 0.854
bphA4
Biphenyl 2,3-dioxygenase ferredoxin reductase subunit (BphA4); Part of the electron transfer component of biphenyl dioxygenase, transfers electrons from ferredoxin (BphF) to NADH.
  
 0.854
Bxe_A0283
Malate dehydrogenase (oxaloacetatedecarboxylating) (NADP+)., Phosphate acetyltransferase; Belongs to the malic enzymes family.
    
 0.588
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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