STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0306Putative alcohol dehydrogenase. (575 aa)    
Predicted Functional Partners:
Bxe_B2425
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 
 0.844
pqqB
Pyrroloquinoline quinone biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
 
  
 0.839
Bxe_B2474
WD-40 repeat-containing protein.
 
 
 0.838
pqqC
Pyrroloquinoline quinone synthesis C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.
 
  
 0.822
flhA
Glutathione-dependent formaldehyde dehydrogenase(FlhA); Function confirmed by biochemical assay & mutantanalysis; Citation: J Bacteriol, 186:2173-2178; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.821
Bxe_A1844
Zinc-containing alcohol dehydrogenase superfamily.
   
 
 0.803
Bxe_B1754
Zinc-containing alcohol dehydrogenase superfamily.
   
 
 0.803
pqqE
Pyrroloquinoline quinone synthesis E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.793
Bxe_B0308
Putative coenzyme PQQ synthesis protein D.
 
  
 0.777
pqqD
Pyrroloquinoline quinone synthesis D.
 
  
 0.761
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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