Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0366ABC peptide transporter, inner membrane subunit. (311 aa)    
Predicted Functional Partners:
Bxe_B0367
ABC peptide transporter, inner membrane subunit.
 
 
 0.986
Bxe_B0369
ABC peptide transporter, ATPase subunit.
 
 
 0.982
Bxe_B0365
ABC peptide transporter, periplasmic ligand binding protein.
 
 
 0.978
Bxe_B0368
ABC peptide transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 
 0.978
Bxe_A0838
ABC peptide transporter, inner membrane subunit.
 
 0.945
Bxe_B0064
ABC nickel transporter, inner membrane subunit.
 
 0.945
Bxe_C0195
ABC peptide/opine/nickel family transporter, inner membrane subunit.
 
 0.945
Bxe_A0184
ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit.
 
 0.943
Bxe_B0755
ABC oligopeptide/dipeptide transporter, inner membrane subunit.
 
 0.943
Bxe_B1972
ABC peptide transporter, inner membrane subunit.
 
 0.943
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (14%) [HD]