STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0384Putative glycosyltransferase. (401 aa)    
Predicted Functional Partners:
Bxe_B0385
Conserved hypothetical protein.
   
 0.905
Bxe_B0386
Conserved hypothetical protein.
 
   
 0.899
Bxe_B0387
Conserved hypothetical protein 374.
 
     0.880
Bxe_B0911
TPR domain protein.
 
 
 0.839
Bxe_A2063
Putative (ceramide) glucosyltransferase.
  
  
 
0.831
Bxe_A2062
Putative methyltransferase, or Fe-S oxidoreductase.
   
 0.810
Bxe_A2069
Hypothetical phospho-beta-glucosidase, YdjC- like protein, cellobiose degradation; Citation: Keyhani,N.O. and Roseman,S.Proc. Natl.Acad. Sci. U.S.A. 94 (26), 14367-14371 (1997).
 
   
 0.798
Bxe_B0022
Conserved hypothetical protein.
 
 
 0.781
Bxe_B0020
Glycosyl transferase, group 2 family.
 
     0.757
Bxe_A0959
Conserved hypothetical protein; TPR domain present.
 
 
 
 0.742
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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