STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0427Conserved hypothetical protein. (319 aa)    
Predicted Functional Partners:
Bxe_B0428
Putative monooxygenase.
    0.955
Bxe_B0429
Conserved hypothetical protein.
 
     0.894
Bxe_A2727
Putative 3-(3-hydroxy- phenyl)propionate hydroxylase (MhpA); Citation: J. Bacteriol. 179 (8), 2573-2581 (1997).J.Chem. Biol. 9 (9), 1017-1026 (2002).
    0.835
Bxe_B1226
Putative oxygenase.
    0.832
Bxe_B0425
Transcriptional regulator, IclR family.
 
     0.746
Bxe_B0426
Transcriptional regulator, IclR family.
 
     0.736
Bxe_A2930
Putative thiosulfate sulfurtransferase, Rhodanese domain-containing.
  
 0.693
Bxe_B2405
Putative rhodanese-like domain protein.
  
 0.693
Bxe_B1461
Putative ankyrin repeat protein.
   
 0.683
Bxe_A0289
Transcriptional regulator, TetR family; Citation: J. Bacteriol. 187 (4), 1493-1503 (2005).Environ Microbiol. 2002 Dec;4(12):824-41; Phenylacetyl-CoA pathway.
  
     0.670
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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