STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0516Putative lipoprotein. (573 aa)    
Predicted Functional Partners:
Bxe_A2806
Putative hemolysin activation/secretion signal peptide protein, FhaC/HxuB; Citation: Cope,L.D., Yogev,R., Muller-Eberhard, U.and Hansen,E.J. A gene cluster involved in the utilizationof both free heme and heme:hemopexin by Haemophilusinfluenzae type b. J. Bacteriol. 177 (10), 2644- 2653(1995).
 
 0.868
Bxe_A4237
Conserved hypothetical protein.
 
 
 0.787
Bxe_B1041
Outer membrane porin, OmpC family.
  
     0.751
Bxe_A1610
Conserved hypothetical lipoprotein.
  
     0.745
Bxe_A4279
Outer membrane porin, OmpC family.
  
     0.727
Bxe_A2793
Putative lipoprotein transmembrane.
  
     0.718
Bxe_A4221
Putative membrane protein.
  
     0.718
Bxe_A0273
Outer membrane porin, OmpW family.
  
     0.707
Bxe_A0297
Lipase/acylhydrolase.
  
 0.706
Bxe_A2233
Hypothetical protein.
  
 0.706
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.