STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0521ABC Fe3+-siderophore transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (704 aa)    
Predicted Functional Partners:
Bxe_B0520
ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit.
 0.999
Bxe_B1929
ABC Fe+3 siderophore/cobalamin transporter, ATPase subunit.
 0.999
Bxe_A3500
ABC Fe3+-hydroxamate/cobalamin transporter, ATPase subunit.
 0.998
Bxe_A3496
ABC Fe3+-hydroxamate/cobalamin transporter, periplasmic ligand binding protein.
 
 0.997
Bxe_A4249
Putative ABC Fe+3/siderophore transporter, periplasmic ligand binding protein.
  
 0.994
Bxe_B0523
ABC Fe3+-hydroxamate transporter, periplasmic ligand binding protein.
 
 
 0.991
Bxe_B0522
Putative iron reductase.
 
  
 0.924
Bxe_B0519
Conserved hypothetical protein.
 
   
 0.834
Bxe_B0518
Conserved hypothetical protein.
  
  
 0.726
Bxe_B0517
Sigma-24 (FecI); Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.673
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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