Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bxe_A0049 | Bxe_A1955 | Bxe_A0049 | Bxe_A1955 | Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Alpha/beta hydrolase fold protein. | 0.645 |
Bxe_A0049 | Bxe_A3549 | Bxe_A0049 | Bxe_A3549 | Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | HOMODA hydrolase (CmtE); P-cumate pathway; Citation: J. Bacteriol. 178 (5), 1351-1362 (1996). | 0.645 |
Bxe_A0049 | Bxe_B0534 | Bxe_A0049 | Bxe_B0534 | Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Putative peroxidase. | 0.645 |
Bxe_A0049 | Bxe_B1132 | Bxe_A0049 | Bxe_B1132 | Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Putative hydrolase. | 0.645 |
Bxe_A0097 | Bxe_A1955 | Bxe_A0097 | Bxe_A1955 | Putative acyl carrier protein. | Alpha/beta hydrolase fold protein. | 0.529 |
Bxe_A0097 | Bxe_A3549 | Bxe_A0097 | Bxe_A3549 | Putative acyl carrier protein. | HOMODA hydrolase (CmtE); P-cumate pathway; Citation: J. Bacteriol. 178 (5), 1351-1362 (1996). | 0.529 |
Bxe_A0097 | Bxe_A4238 | Bxe_A0097 | Bxe_A4238 | Putative acyl carrier protein. | 3-oxoadipate enol-lactonase. | 0.529 |
Bxe_A0097 | Bxe_B0534 | Bxe_A0097 | Bxe_B0534 | Putative acyl carrier protein. | Putative peroxidase. | 0.529 |
Bxe_A0097 | Bxe_B1132 | Bxe_A0097 | Bxe_B1132 | Putative acyl carrier protein. | Putative hydrolase. | 0.529 |
Bxe_A0097 | Bxe_C1391 | Bxe_A0097 | Bxe_C1391 | Putative acyl carrier protein. | Putative hydrolase. | 0.544 |
Bxe_A0152 | Bxe_A1955 | Bxe_A0152 | Bxe_A1955 | Hypothetical protein. | Alpha/beta hydrolase fold protein. | 0.529 |
Bxe_A0152 | Bxe_A3549 | Bxe_A0152 | Bxe_A3549 | Hypothetical protein. | HOMODA hydrolase (CmtE); P-cumate pathway; Citation: J. Bacteriol. 178 (5), 1351-1362 (1996). | 0.529 |
Bxe_A0152 | Bxe_A4238 | Bxe_A0152 | Bxe_A4238 | Hypothetical protein. | 3-oxoadipate enol-lactonase. | 0.529 |
Bxe_A0152 | Bxe_B0534 | Bxe_A0152 | Bxe_B0534 | Hypothetical protein. | Putative peroxidase. | 0.529 |
Bxe_A0152 | Bxe_B1132 | Bxe_A0152 | Bxe_B1132 | Hypothetical protein. | Putative hydrolase. | 0.529 |
Bxe_A0152 | Bxe_C1391 | Bxe_A0152 | Bxe_C1391 | Hypothetical protein. | Putative hydrolase. | 0.544 |
Bxe_A0928 | Bxe_A1955 | Bxe_A0928 | Bxe_A1955 | Putative acyl-carrier protein. | Alpha/beta hydrolase fold protein. | 0.535 |
Bxe_A0928 | Bxe_A3549 | Bxe_A0928 | Bxe_A3549 | Putative acyl-carrier protein. | HOMODA hydrolase (CmtE); P-cumate pathway; Citation: J. Bacteriol. 178 (5), 1351-1362 (1996). | 0.535 |
Bxe_A0928 | Bxe_A4238 | Bxe_A0928 | Bxe_A4238 | Putative acyl-carrier protein. | 3-oxoadipate enol-lactonase. | 0.529 |
Bxe_A0928 | Bxe_B0534 | Bxe_A0928 | Bxe_B0534 | Putative acyl-carrier protein. | Putative peroxidase. | 0.535 |
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