Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_A1976 | Bxe_B0569 | Putative glutathione S-transferase. | Conserved hypothetical protein. | 0.480 |
Bxe_A2781 | Bxe_B0569 | 4-cresol dehydrogenase (hydroxylating). | Conserved hypothetical protein. | 0.524 |
Bxe_B0200 | Bxe_B0569 | Hypothetical protein. | Conserved hypothetical protein. | 0.535 |
Bxe_B0200 | Bxe_C0075 | Hypothetical protein. | Conserved hypothetical protein. | 0.465 |
Bxe_B0561 | Bxe_B0569 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.482 |
Bxe_B0569 | Bxe_A1976 | Conserved hypothetical protein. | Putative glutathione S-transferase. | 0.480 |
Bxe_B0569 | Bxe_A2781 | Conserved hypothetical protein. | 4-cresol dehydrogenase (hydroxylating). | 0.524 |
Bxe_B0569 | Bxe_B0200 | Conserved hypothetical protein. | Hypothetical protein. | 0.535 |
Bxe_B0569 | Bxe_B0561 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.482 |
Bxe_B0569 | Bxe_B1425 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.493 |
Bxe_B0569 | Bxe_B1868 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.492 |
Bxe_B0569 | Bxe_B2141 | Conserved hypothetical protein. | Putative alpha KG dependent 2,4-D dioxygenase. | 0.480 |
Bxe_B0569 | Bxe_B2152 | Conserved hypothetical protein. | Putative alpha KG dependent 2,4-D dioxygenase. | 0.469 |
Bxe_B0569 | Bxe_B2155 | Conserved hypothetical protein. | Putative alpha KG dependent 2,4-D dioxygenase. | 0.486 |
Bxe_B0569 | Bxe_C0075 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.505 |
Bxe_B1425 | Bxe_B0569 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.493 |
Bxe_B1868 | Bxe_B0569 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.492 |
Bxe_B2141 | Bxe_B0569 | Putative alpha KG dependent 2,4-D dioxygenase. | Conserved hypothetical protein. | 0.480 |
Bxe_B2152 | Bxe_B0569 | Putative alpha KG dependent 2,4-D dioxygenase. | Conserved hypothetical protein. | 0.469 |
Bxe_B2155 | Bxe_B0569 | Putative alpha KG dependent 2,4-D dioxygenase. | Conserved hypothetical protein. | 0.486 |
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