Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_B0218 | Bxe_B0531 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.436 |
Bxe_B0218 | Bxe_B0792 | TonB-dependent siderophore receptor. | Putative 2OG-Fe(II) oxygenase superfamily protein. | 0.931 |
Bxe_B0218 | Bxe_B0909 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.437 |
Bxe_B0218 | Bxe_C0231 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.599 |
Bxe_B0218 | Bxe_C1049 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.440 |
Bxe_B0218 | Bxe_C1050 | TonB-dependent siderophore receptor. | Putative FecR. | 0.412 |
Bxe_B0531 | Bxe_B0218 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.436 |
Bxe_B0531 | Bxe_B0792 | TonB-dependent siderophore receptor. | Putative 2OG-Fe(II) oxygenase superfamily protein. | 0.705 |
Bxe_B0531 | Bxe_B0794 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.435 |
Bxe_B0531 | Bxe_B0909 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.694 |
Bxe_B0531 | Bxe_C0231 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.721 |
Bxe_B0531 | Bxe_C0723 | TonB-dependent siderophore receptor. | TonB-dependent siderophore receptor. | 0.437 |
Bxe_B0531 | Bxe_C1050 | TonB-dependent siderophore receptor. | Putative FecR. | 0.986 |
Bxe_B0792 | Bxe_B0218 | Putative 2OG-Fe(II) oxygenase superfamily protein. | TonB-dependent siderophore receptor. | 0.931 |
Bxe_B0792 | Bxe_B0531 | Putative 2OG-Fe(II) oxygenase superfamily protein. | TonB-dependent siderophore receptor. | 0.705 |
Bxe_B0792 | Bxe_B0793 | Putative 2OG-Fe(II) oxygenase superfamily protein. | Conserved hypothetical protein. | 0.897 |
Bxe_B0792 | Bxe_B0794 | Putative 2OG-Fe(II) oxygenase superfamily protein. | TonB-dependent siderophore receptor. | 0.983 |
Bxe_B0792 | Bxe_B0909 | Putative 2OG-Fe(II) oxygenase superfamily protein. | TonB-dependent siderophore receptor. | 0.510 |
Bxe_B0792 | Bxe_B1651 | Putative 2OG-Fe(II) oxygenase superfamily protein. | Hypothetical protein. | 0.460 |
Bxe_B0792 | Bxe_C0231 | Putative 2OG-Fe(II) oxygenase superfamily protein. | TonB-dependent siderophore receptor. | 0.453 |
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