STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0995Transcriptional regulator, GntR family. (249 aa)    
Predicted Functional Partners:
Bxe_C0342
Transcriptional regulator, GntR family.
  
     0.775
Bxe_C0836
Transcriptional regulator, GntR family.
  
     0.772
Bxe_B1823
Transcriptional regulator, histidine utilization repressor, GntR family.
  
     0.760
Bxe_A4447
Transcriptional regulator, GntR family.
  
    0.665
Bxe_A4155
N-acetylglucosamine 6-phosphate deacetylase.
 
  
 0.615
Bxe_B2173
Transcriptional regulator, GntR family.
  
    0.536
Bxe_A4153
PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family.
    
 0.529
Bxe_A0634
Transcriptional regulator, XRE family.
  
  
 0.515
Bxe_A2995
Transcriptional Regulator, XRE(MerR) family with Cupin sensor domain.
  
  
 0.515
Bxe_B0758
Transcriptional regulator, XRE family with cupin sensor.
  
  
 0.515
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.