Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bxe_A1161 | Bxe_B1198 | Bxe_A1161 | Bxe_B1198 | Hypothetical protein. | Conserved hypothetical protein. | 0.458 |
Bxe_A2939 | Bxe_B1198 | Bxe_A2939 | Bxe_B1198 | Putative transmembrane protein; Similar to transglutaminase/cysteine proteases. | Conserved hypothetical protein. | 0.438 |
Bxe_A3334 | Bxe_B1198 | Bxe_A3334 | Bxe_B1198 | Phenazine biosynthesis PhzC/PhzF protein. | Conserved hypothetical protein. | 0.431 |
Bxe_B1197 | Bxe_B1198 | Bxe_B1197 | Bxe_B1198 | Major facilitator superfamily (MFS) multidrug efflux pump. | Conserved hypothetical protein. | 0.501 |
Bxe_B1198 | Bxe_A1161 | Bxe_B1198 | Bxe_A1161 | Conserved hypothetical protein. | Hypothetical protein. | 0.458 |
Bxe_B1198 | Bxe_A2939 | Bxe_B1198 | Bxe_A2939 | Conserved hypothetical protein. | Putative transmembrane protein; Similar to transglutaminase/cysteine proteases. | 0.438 |
Bxe_B1198 | Bxe_A3334 | Bxe_B1198 | Bxe_A3334 | Conserved hypothetical protein. | Phenazine biosynthesis PhzC/PhzF protein. | 0.431 |
Bxe_B1198 | Bxe_B1197 | Bxe_B1198 | Bxe_B1197 | Conserved hypothetical protein. | Major facilitator superfamily (MFS) multidrug efflux pump. | 0.501 |
Bxe_B1198 | Bxe_B1199 | Bxe_B1198 | Bxe_B1199 | Conserved hypothetical protein. | Procollagen-proline,2-oxoglutarate-4- dioxygenase. | 0.484 |
Bxe_B1198 | Bxe_B2696 | Bxe_B1198 | Bxe_B2696 | Conserved hypothetical protein. | Putative hydrolase. | 0.492 |
Bxe_B1198 | Bxe_C1391 | Bxe_B1198 | Bxe_C1391 | Conserved hypothetical protein. | Putative hydrolase. | 0.492 |
Bxe_B1198 | glgC | Bxe_B1198 | Bxe_A2934 | Conserved hypothetical protein. | Putative glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.575 |
Bxe_B1198 | icmF | Bxe_B1198 | Bxe_A4277 | Conserved hypothetical protein. | Methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly (By similarity). Does not exhibit methylmalonyl- CoA mutase (MCM) activity. | 0.546 |
Bxe_B1198 | pdxH | Bxe_B1198 | Bxe_A0741 | Conserved hypothetical protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.438 |
Bxe_B1199 | Bxe_B1198 | Bxe_B1199 | Bxe_B1198 | Procollagen-proline,2-oxoglutarate-4- dioxygenase. | Conserved hypothetical protein. | 0.484 |
Bxe_B2696 | Bxe_B1198 | Bxe_B2696 | Bxe_B1198 | Putative hydrolase. | Conserved hypothetical protein. | 0.492 |
Bxe_B2696 | icmF | Bxe_B2696 | Bxe_A4277 | Putative hydrolase. | Methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly (By similarity). Does not exhibit methylmalonyl- CoA mutase (MCM) activity. | 0.546 |
Bxe_C1391 | Bxe_B1198 | Bxe_C1391 | Bxe_B1198 | Putative hydrolase. | Conserved hypothetical protein. | 0.492 |
Bxe_C1391 | icmF | Bxe_C1391 | Bxe_A4277 | Putative hydrolase. | Methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly (By similarity). Does not exhibit methylmalonyl- CoA mutase (MCM) activity. | 0.546 |
glgC | Bxe_B1198 | Bxe_A2934 | Bxe_B1198 | Putative glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | Conserved hypothetical protein. | 0.575 |
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