STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B13802OG-Fe(II) oxygenase superfamily; Belongs to the iron/ascorbate-dependent oxidoreductase family. (353 aa)    
Predicted Functional Partners:
Bxe_B1379
Conserved hypothetical protein.
 
     0.859
Bxe_A0145
flgG; flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.624
Bxe_B0525
Non-ribosomal peptide synthase.
     
 0.623
Bxe_A1537
Putative exported protein.
    
   0.558
Bxe_A2128
Hypothetical protein.
    
   0.558
Bxe_B1378
Putative trancriptional regulator, MarR family.
       0.520
Bxe_B0526
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.512
Bxe_A0949
Xanthine oxidase / xanthine dehydrogenase, molybdenum binding subunit apoprotein.
    
 0.507
Bxe_A3885
Xanthine dehydrogenase, molybdenum binding subunit apoprotein / Xanthine oxidase.
    
 0.507
Bxe_A1730
Zinc-containing alcohol dehydrogenase superfamily.
  
 
 0.480
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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