STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B1583Conserved hypothetical protein. (178 aa)    
Predicted Functional Partners:
Bxe_B1579
Putative electron transfer flavoprotein beta- subunit.
 
    0.983
Bxe_B1581
Putative membrane protein.
 
    0.980
Bxe_B1584
Membrane dipeptidase.
 
  
 0.969
Bxe_B1578
Iron-sulfur Rieske protein.
 
    0.956
Bxe_B1577
Putative ferredoxin oxidoreductase protein.
 
    0.943
Bxe_A2062
Putative methyltransferase, or Fe-S oxidoreductase.
  
 
 0.940
Bxe_B0385
Conserved hypothetical protein.
  
 
 0.940
Bxe_B1597
Sarcosine oxidase, gamma subunit.
 
    0.940
Bxe_C0261
Putative radical SAM domain/B12 binding domain protein.
  
 
 0.940
Bxe_B1599
Putative sarcosine oxidase delta subunit; SoxD.
 
    0.936
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.