STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B1667Putative type-b cytochrome. (179 aa)    
Predicted Functional Partners:
Bxe_B1668
Putative catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
     0.923
Bxe_A3458
Putative catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
     0.747
Bxe_B2065
Putative exported protein; Belongs to the UPF0312 family.
 
  
 0.627
Bxe_B2163
Transcriptional regulator, TetR family.
 
      0.585
Bxe_A3996
Putative exported protein; Belongs to the UPF0312 family.
 
  
 0.580
Bxe_B1669
Hypothetical protein.
       0.501
Bxe_B2066
Putative exported protein; Belongs to the UPF0312 family.
 
  
 0.494
Bxe_B1664
Putative helicase.
 
      0.492
Bxe_A3995
Putative exported protein; Belongs to the UPF0312 family.
 
  
 0.478
Bxe_B3019
Putative YceI like family protein; Belongs to the UPF0312 family.
 
  
 0.473
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.