STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B1799Gluconolactonase. (309 aa)    
Predicted Functional Partners:
Bxe_A0549
Putative short-chain dehydrogenase/reductase, FabG-like protein.
 
  
  0.935
Bxe_B1800
Conserved hypothetical protein.
   
 0.933
Bxe_C1359
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
  0.929
Bxe_C1363
D-xylose dehydrogenase.
 
  
  0.830
Bxe_C1362
Xylono-1,4-lactonase.
  
  
 
0.820
Bxe_B1801
Galactarate dehydratase.
 
   
 0.640
Bxe_B2153
Gluconolactonase.
  
  
  0.586
Bxe_C0969
Gluconolactonase.
  
  
  0.538
Bxe_B0994
Putative mandelate racemase / muconatelactonizing enzyme.
 
  
 0.520
Bxe_B1897
Conserved hypothetical protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.512
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.