STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B1885Transcriptional regulator, IclR family. (249 aa)    
Predicted Functional Partners:
Bxe_B2051
Transcriptional regulator, IclR family.
  
     0.775
Bxe_C0607
Transcriptional regulator, IclR family; Citation: J. Bacteriol. 186:3631-3639(2004).
  
     0.770
Bxe_B1384
Urea amidolyase-related protein.
  
 
  0.768
Bxe_C0993
Transcriptional regulator, IclR family; Putative regulator of homogentisate pathway (HmgR).
  
     0.768
Bxe_A0194
Urea amidolyase-related protein.
  
    0.538
Bxe_A0195
Conserved hypothetical protein 370.
  
    0.526
Bxe_B1889
Putative glutaconate CoA-transferase, subunit B.
 
   
 0.473
Bxe_A3613
Transcriptional regulator, IclR family.
  
     0.454
Bxe_B1888
Putative Coenzyme A transferase.
 
   
 0.438
Bxe_A0285
Oxidoreductase.
    
  0.424
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.