STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2106Putative peptidase, M23/M37 family. (328 aa)    
Predicted Functional Partners:
Bxe_B2105
Hypothetical protein.
       0.773
Bxe_A0158
Flagellar motor switch protein FliM.
    
 
 0.737
Bxe_B2104
Conserved hypothetical protein.
 
   
 0.734
Bxe_A0354
Putative penicillin-binding 1 (peptoglycansynthetase) transmembrane protein, MrcA.
 
   
 0.720
Bxe_B1663
Putative lipoprotein.
 
 
0.719
Bxe_B2205
Putative lipoprotein.
 
 
0.716
Bxe_A1961
Putative penicillin-binding (peptidoglycan synthetase) transmembrane protein, mrcA; Citation: Meberg BM, Sailer FC, Nelson DE, YoungKD. J Bacteriol. 2001 183(20):6148-9. Denome SA, Elf PK,Henderson TA, Nelson DE, Young KD. J Bacteriol. 1999181(13):3981-93.
 
   
 0.706
mtgA
Putative monofunctional biosynthetic peptidoglycan transglycosylase, MtgA; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
   
 0.698
Bxe_A2510
Signal peptidase I, Serine peptidase, MEROPS family S26A; Belongs to the peptidase S26 family.
 
  
 0.690
Bxe_A1084
Signal peptidase I, Serine peptidase, MEROPS family S26A; Belongs to the peptidase S26 family.
 
  
 0.647
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.