STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2137Conserved hypothetical protein. (322 aa)    
Predicted Functional Partners:
Bxe_A0365
Glutamate synthase (NADH) large subunit.
    
  0.836
Bxe_B0663
Isoquinoline 1-oxidoreductase.
 
 0.763
Bxe_A1302
Putative Di-haem cytochrome c peroxidase.
  
 
 0.758
Bxe_B0346
Putative cytochrome c peroxidase.
  
 
 0.758
Bxe_A4171
Putative cytochrome c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.739
Bxe_B1272
Conserved hypothetical protein.
   
   0.736
Bxe_A4075
Putative cytochrome c precursor.
  
 0.717
Bxe_A0650
Putative periplasmic cytochrome c.
  
 0.707
Bxe_A2187
Putative alcohol dehydrogenase cytochrome c subunit precursor, cytochrome c553; Citation: Takeda,Y. and Shimizu,T.J. Ferment.Bioeng. 72, 1-6 (1991)Kondo,K. and Horinouchi, S.Appl.Environ. Microbiol. 63 (3), 1131-1138 (1997).
  
 0.707
Bxe_A4096
Putative cytochrome c.
  
 0.707
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.