STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2183ABC phosphonate transporter, ATPase subunit PhnK. (256 aa)    
Predicted Functional Partners:
Bxe_B2179
Putative Phosphonate metabolism protein PhnG.
 
 
 0.999
Bxe_B2180
Putative phosphonate metabolism PhnH protein.
 
 
 0.999
Bxe_B2181
Alkylphosphonate utilization operon protein PhnI.
 
 
 0.999
Bxe_B2182
Putative phosphonate metabolism PhnJ protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 0.999
Bxe_B2184
ABC phosphonate transporter, ATPase subunit PhnL.
 
0.999
Bxe_B2185
Putative phosphonate metabolism protein PhnM.
 
  
 0.985
Bxe_B2178
Transcriptional regulator, GntR family.
 
  
 0.969
Bxe_B0838
ABC phosphonates transporter, periplasmic ligand binding protein PhnD.
 
  
 0.967
phnN
Putative phosphonate metabolism protein; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.964
Bxe_B2177
Conserved hypothetical protein.
 
  
 0.957
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.