STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2239Putative diguanylate cyclase (GGDEF domain). (387 aa)    
Predicted Functional Partners:
Bxe_A3273
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 0.935
Bxe_B2627
GAF sensor diguanylate phosphsdiesterase (EAL domain).
 
 0.916
Bxe_B0221
GAF sensor hybrid histidine kinase.
  
 
 0.903
Bxe_B1520
Signal transduction histidine kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.887
Bxe_C0521
Multi sensor hybrid histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.887
Bxe_A4283
Diguanylate cyclase/phosphodiesterase.
 
 
 0.881
Bxe_C1138
Putative diguanylate phosphodiesterase (EAL domain).
 
 
 0.861
Bxe_B0499
Putative diguanylate phosphodiesterase (EAL domain).
 
 0.860
Bxe_C1172
Diguanylate phosphodiesterase.
 
 
 0.859
Bxe_A1835
PAS/PAC sensor hybrid histidine kinase.
 0.857
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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