STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2417Putative MxaK-like protein. (213 aa)    
Predicted Functional Partners:
Bxe_B2416
Putative MxaL-like protein.
    
  0.981
Bxe_B2418
Putative MxaC-like protein.
    
  0.981
ABE33572.1
Hypothetical protein.
    
  0.981
Bxe_B2427
Methanol dehydrogenase-like protein (xoxF).
    
  0.926
fae
Formaldehyde-activating enzyme.
    
  0.919
Bxe_B2420
Putative MxaS-like protein.
       0.797
Bxe_B2421
Putative MxaR-like protein.
       0.797
Bxe_B2425
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
    
  0.653
Bxe_B2415
Putative quinoprotein alcohol dehydrogenase.
    
  0.651
Bxe_B2292
Hypothetical protein.
    
  0.560
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.