STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2489Anti-Sigma regulatory factor (Ser/Thr protein kinase and phosphatase). (330 aa)    
Predicted Functional Partners:
Bxe_B2486
Anti-Sigma-factor antagonist (STAS) domain protein.
 
 0.999
Bxe_B2487
Anti-Sigma-factor antagonist (STAS) domain protein.
 
 0.999
Bxe_B1216
Multi-sensor hybrid histidine kinase.
 
 
 0.934
Bxe_B2927
Hpt domain protein.
  
 
 0.908
fliA
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
 
 0.904
Bxe_A0140
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.856
Bxe_A0150
Flagellar hook-associated protein.
   
    0.856
Bxe_A0165
Flagellar motor switch protein FliG.
   
    0.856
Bxe_B2488
Putative Anti-Sigma regulatory factor (Ser/Thr protein kinase).
 
    
0.856
Bxe_B2490
Histidine kinase.
 
 
 0.846
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.